Single-cell genomics to study cellular variability, fate decisions and regulatory networks.
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Single-cell
Publications
Dries R#, Zhu Q#, Eng CHL, Sarkar A, Bao F, George RE, Pierson N, Cai L, Yuan GC.
Giotto, a pipeline for integrative analysis and visualization of single-cell spatial transcriptomic data..
In BioRxiv.,
2019.
Tracy S, Yuan GC and Dries R.
RESCUE: imputing dropout events in single- cell RNA-sequencing data..
In BMC Bioinformatics.,
2019.
Chee-Huat Linus eng, Michael Lawson, Qian Zhu, Ruben Dries, Noushin Koulena, Yodai takei, Jina Yun, Christopher Cronin, Christoph Karp, Guo-Cheng Yuan & Long Cai.
Transcriptome-scale super-resolved imaging in tissues by RNA seqFISH+.
In Nature.,
2019.
Qian Zhu, Sheel Shah, Ruben Dries, Long Cai & Guo-Cheng Yuan.
Identification of spatially associated subpopulations by combining scrNAseq and sequential fluorescence in situ hybridization data..
In Nature Biotechnology.,
2018.